R1EBS0F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (63%)
Global pLDDT
91.94
Species
strain UCR-NP2
UniProt
Structure Prediction Model
AlphaFold v4:  R1EBS0
PDB structures
-
Model length
254
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.3 22-248 227 1-21, 249-254 21 6
Model Sequence
MASTQLDNPDVPKGKKSFVPLENNPEVMTSLVHKLGLSSKLAFHDVFSIDEPELLAFVPRPAQAVLLIFPVSDTYEKFRREEDSSKAEYDGSGASEPVVWYKQTIGNACGLIGLLHGVSNGQARSHIEPDSDLAKLLASAIPLKPAARADLLYESQALESAHQSAASGGDTAAPDANAAVDLHYVCFVKSGDDRLWEMDGRRKGPLERGVLAADEDVLSEKALNLGVRSFLKREQEAGGGDLRFSLIALAPSFD
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (60%)
Global pLDDT
91.0
Species
strain UCR-NP2
UniProt
Structure Prediction Model
PDB structures
-
Model length
254
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.3 21-248 228 1-20, 249-254 20 6
Model Sequence
MASTQLDNPDVPKGKKSFVPLENNPEVMTSLVHKLGLSSKLAFHDVFSIDEPELLAFVPRPAQAVLLIFPVSDTYEKFRREEDSSKAEYDGSGASEPVVWYKQTIGNACGLIGLLHGVSNGQARSHIEPDSDLAKLLASAIPLKPAARADLLYESQALESAHQSAASGGDTAAPDANAAVDLHYVCFVKSGDDRLWEMDGRRKGPLERGVLAADEDVLSEKALNLGVRSFLKREQEAGGGDLRFSLIALAPSFD
Comments
Domain Eukaryota
Family Botryosphaeriaceae
Species (Full Name) Botryosphaeria parva (strain UCR-NP2) (Grapevine canker fungus) (Neofusicoccum parvum)
Gene UCRNP2_8375
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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