R5BKD9F1

RNA methyltransferase TrmH family
AF4
Categories voted by users:
Information
Protein name
RNA methyltransferase TrmH family
Main knot
31 (73%)
Global pLDDT
95.22
Species
Veillonella sp
UniProt
Structure Prediction Model
AlphaFold v4:  R5BKD9
PDB structures
-
Model length
259
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.8 189-231 43 1-188, 232-259 188 28
Model Sequence
MELITSKDNKTLKYAQSLQRKKYRKLHGEYLAEGLRTVSDMMATGLVTTIFVKEDSNCESIISEAEQRGIKLWSVSSDLMHTIESTVNGQGIVAIVKKQHHDINDLVITDGLYVLLDEVQDPGNLGTIIRTALAAGAKGLFLTKGSVDPYNEKTVRSTMSAITKIPIFENVTMENVVGLMKNSQLTAYATALDNAEAIQDVTFAKQTLLLLGNEANGLSEAWFNMADNRITIPMYGPIESLNLSVAAALCMYAVRESWL
Comments
ESM1
Categories voted by users:
Information
Protein name
RNA methyltransferase TrmH family
Main knot
31 (68%)
Global pLDDT
96.96
Species
Veillonella sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
259
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.5 31-231 201 1-30, 232-259 30 28
Model Sequence
MELITSKDNKTLKYAQSLQRKKYRKLHGEYLAEGLRTVSDMMATGLVTTIFVKEDSNCESIISEAEQRGIKLWSVSSDLMHTIESTVNGQGIVAIVKKQHHDINDLVITDGLYVLLDEVQDPGNLGTIIRTALAAGAKGLFLTKGSVDPYNEKTVRSTMSAITKIPIFENVTMENVVGLMKNSQLTAYATALDNAEAIQDVTFAKQTLLLLGNEANGLSEAWFNMADNRITIPMYGPIESLNLSVAAALCMYAVRESWL
Comments
Domain Bacteria
Family Veillonellaceae
Species (Full Name) Veillonella sp. CAG:933
Gene BN814_01926
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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