R5DZR2F1

Oligopeptide transporter, OPT family
AF4
Categories voted by users:
Information
Protein name
Oligopeptide transporter, OPT family
Main knot
52 (68%)
Global pLDDT
88.18
Species
Eubacterium sp
UniProt
Structure Prediction Model
AlphaFold v4:  R5DZR2
PDB structures
-
Model length
635
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.0 51-532 482 1-50, 533-635 50 103
Model Sequence
MNEKQEFKPYIPADKVMPELTVTSVIIGILLAVLFGGANAYLGLRVGMTVSASIPAAVISMGIIRFILRRDSILENNMVQTIGSAGESVAAGAIFTLPALFMWAQEGGTSMPSLIEIALIALIGGFLGVLFMIPLRSALIVQEHGVLPYPEGQACAEVLVAGEEGGAKASTVFAGLGIAAVYKFIADGLKVFPSEVDFTIKPYKGSAVGADVLPALLGVGYICGPKVSSYLLAGGSVAWFMIMPLIALFGGDNIIGPATIPISQMGPSQIWSNYVRYIGAGAVAAGGILSLIKSLPLIVKTFKQAMKGYGKKADGEETRSTKDLPMTLVVLGIGVLAIIMWLIPAIPVNLLSAIIIIIFGFFFATVSSRMVGLVGSSNNPVSGMAIATLLISSAILKATGTIGMNGMVAAISIGSVICIIAAIAGDTSQDLKTGYIVGATPYKQQIGELIGVAVSAVTVGGVLYLLNAAWGYGSTELPAPQATLMKMVVEGVMGNSLPWALVFAGVAIAIVVEILQIPVLPFAVGLYLPIYLSTPIMAGGLVRLYFDKKKGLSEEERKIKVNQGILYSSGLIAGEGLVGILLAVFAIIPVGTATLGDAINLSKVINLGNIGGLVFFVALIATLIAFINKKEKKTN
Comments
Domain Bacteria
Family Eubacteriaceae
Species (Full Name) Eubacterium sp. CAG:86
Gene BN798_01256
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -
How to cite