| Protein name |
Exported protein
|
| Main knot |
51 (88%)
|
| Global pLDDT |
81.65
|
| Species |
Succinatimonas sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
R5EL07
|
| PDB structures |
-
|
| Structure in AlphaLasso |
R5EL07: LS2++C
|
| Model length |
111
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.38 | 45-100 | 56 | 1-44, 101-111 | 44 | 11 |
|
Knot | ||||
|
|
92.86 | 56-89 | 34 | 1-55, 90-111 | 55 | 22 | Knot |
Model Sequence |
MNRLFKTIAYTLGSFLVVTTNVNCANASNISSCTYNGIPLYGKVKVVNSFPDIKVKVVSSFEDLDVQKVSSFADKCGKWQFVDSFSDFKIQFVDSFPDITIKFVQSFPGQK
|
| Protein name |
Exported protein
|
| Main knot |
51 (88%)
|
| Global pLDDT |
82.09
|
| Species |
Succinatimonas sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
R5EL07
|
| PDB structures |
-
|
| Structure in AlphaLasso |
R5EL07: LS2++C
|
| Model length |
111
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.5 | 44-101 | 58 | 1-43, 102-111 | 43 | 10 |
|
Model Sequence |
MNRLFKTIAYTLGSFLVVTTNVNCANASNISSCTYNGIPLYGKVKVVNSFPDIKVKVVSSFEDLDVQKVSSFADKCGKWQFVDSFSDFKIQFVDSFPDITIKFVQSFPGQK
|
| Protein name |
Exported protein
|
| Main knot |
01 (97%)
|
| Species |
Succinatimonas sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
R5EL07: LS2++C
|
| Model length |
111
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MNRLFKTIAYTLGSFLVVTTNVNCANASNISSCTYNGIPLYGKVKVVNSFPDIKVKVVSSFEDLDVQKVSSFADKCGKWQFVDSFSDFKIQFVDSFPDITIKFVQSFPGQK
|
| Domain |
Bacteria
|
| Family |
Succinivibrionaceae
|
| Species (Full Name) |
Succinatimonas sp. CAG:777
|
| Gene |
BN779_00724
|
| PDB structures (whole Protein) |
-
|