R5YF54F1

OPT family oligopeptide transporter
AF4
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Information
Protein name
OPT family oligopeptide transporter
Main knot
52 (65%)
Global pLDDT
88.08
Species
Roseburia sp
UniProt
Structure Prediction Model
AlphaFold v4:  R5YF54
PDB structures
-
Model length
637
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.6 51-536 486 1-50, 537-637 50 101
Model Sequence
MNEKQEFKPYIAPEKVTPELTVTSIIMGVLLAVVFGAANAYLGLRVGMTVSASIPAAVISMGVIRVIMKKNSILESNLVQTIGSAGESLAAGAIFTLPALFLWAAEGKMDKPSILEITVIALIGGLLGVFFMVPLRNALIVREHGVLPYPEGTACAEVLLAGEEGGANASTVFAGLGIAGAFKFIIDGLKLVPSEINIRVKGYAGEIGTQIYPAVMSVGYICGPRISSYMFAGGIISWLVLIPAIVLFGSDLTLYPGTAPIGEMFASGGASAIWGSYIRYIGAGALAAGGIISLIKSLPLIVRTFRDALKSMNGTKEGGNVRTNQDLNMKIILVAIAILTILVWLLPQIPVSLLGAVIVVIFGFFFATVSSRMVGLVGSSNNPVSGMAIATLLIATIILKATGDSGIHGMQGAIAIGSIICIVAAIAGDTSQDLKTGYLLGATPKKQQIGEIIGVIAAGLAISGVLYLLDSAWGFGTEQLGAPQAMLMKMIIEGVMNNNLPWALVFIGVFLAIAVEVVGIPVLPFAIGVYLPVQLNACIMVGGLIRLAFEKSKKEKKDKERIISDGMLYCSGMIAGEGIIGILLAVFAVFKIDEVIDLSGKLNLSEPVATIGSLVVFALIILLVLKFSFWKKKKESK
Comments
Domain Bacteria
Family Lachnospiraceae
Species (Full Name) Roseburia sp. CAG:197
Gene BN528_00597
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -
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