R5ZEP2F1

OPT oligopeptide transporter
AF4
Categories voted by users:
Information
Protein name
OPT oligopeptide transporter
Main knot
52 (66%)
Global pLDDT
87.38
Species
Lachnospiraceae bacterium
UniProt
Structure Prediction Model
AlphaFold v4:  R5ZEP2
PDB structures
-
Model length
645
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.2 51-538 488 1-50, 539-645 50 107
Model Sequence
MEKKNDFKPFISADKVLPEFTVTSVILGMILAVIFGGANAYLGLRVGMTVSASIPAAVISMGVIRVILKKDSILENNMVQTIGSAGESLAAGAIFTIPAIFIWASEKGSGVTAPSFVSIALIALCGGILGVLFMVPLRTALIVEEHGVLPYPEGTACAEVLLAGEEGGSKSKVVFAGLGIAAVYKFIADGLKLFPSEVEFSMQGQYTTSVGMDVLPALAGVGYICGVQVSSYLFAGGVLSYLVLIPAIAYFGGDSLSKVVDETGKALAFNQLGASQIWSNYVRYIGAGAVAAGGLISLIKTFPTMIKTFGHAMKGFGKKGDSQLRTQQDISMKVVLGGILIIAVLIWLLPEIPVSFLGAVMIVVFGFFFATVSSRMVGIVGSSNNPVSGMAIATLIVTTFILKATGNTGAAGMVSAISIGTVICIVAAMAGDTSQDLKTGYIVGATPRLQQIGELIGAIVAAFAIGGVMYLLNAAWGFGSDQIPAPQATLMKMVVEGVMGGTLPWVLIFMGVFIAIVVEILGIPVLAFSIGLYLPIYLSTPIMVGGLIRWFIDNKRKYDSDAARKDGSDRGVLYAAGMIAGEGIVGILLAVLAVFGVADKINLSSVYGAAFQSVGNWVGLAAFVVLLAILFYFTRNKKTIEVDAK
Comments
Domain Bacteria
Family Lachnospiraceae
Species (Full Name) Lachnospiraceae bacterium CAG:25
Gene BN562_01988
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -
How to cite