R8ARU4 | AlphaKnot 2.0

AF4

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Information

Protein name	Sodium:calcium antiporter
Main knot	3₁ (67%)
Global pLDDT	85.89
Species	Plesiomonas shigelloides
UniProt	R8ARU4
Structure Prediction Model	AlphaFold v4: R8ARU4
PDB structures	-
Model length	385
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.6	24-255	232	1-23, 256-385	23	130

Model Sequence

MDYLLLAIGLVLLVVGADGLVKGAARLAASIGIPSLVIGLTVVAFGTSAPELAVCIRSALAGQSEMAIANVVGSNIFNVLFILGLAAIITPLAISRQLIRQDVPLMVLASMLVFYMIRDGVLSRLDASILVVLLLAYTVFLFVQGKRTEATERASGANNSVAPSTSGAAPSDAASTEQGDEVDALIRGTHPTWQNLLWIVGGLACLVAGANLLVNSAVNIARAFAVSEAVIGLTIVAVGTSLPEVMTSIVASIKGQRDIAVGNVVGSNIFNLLAVLGVSGVLSSNGLAGNEQLVQQDFPVMLAVALLCVPLFFTGAILSRIEGALFFILYLAYTLFLIGGALHAPWLASVQGIIVYALIPLTVVVVIGSLVKDRYDKRQLSKVSE

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium:calcium antiporter
Main knot	3₁ (72%)
Global pLDDT	93.27
Species	Plesiomonas shigelloides
UniProt	R8ARU4
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	385
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.9	24-274	251	1-23, 275-385	23	111

Model Sequence

Comments

Domain	Bacteria
Family	Enterobacteriaceae
Species (Full Name)	Plesiomonas shigelloides 302-73
Gene	PLESHI_07820
PFAM codes	PF01699
InterPro codes	IPR004481, IPR004837, IPR044880
PDB structures (whole Protein)	-

R8ARU4F1

AF4

Model Sequence

ESM1

Model Sequence