| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (48%)
|
| Global pLDDT |
89.48
|
| Species |
Fission yeast
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 S9VWF0
|
| PDB structures |
-
|
| Model length |
226
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.6 | 1-226 | 226 | 0 | 0 |
|
Model Sequence |
MWKPLENNPEVLEPYLRKLGILNASVFDLFTLDEIPEYIPRPVAALLLVLPSPGKFDKSQKESKLLSADSKEVVWFPQLVSNACGTVALVHAIANGNLSKQKYNSKFTKDLLKNAREQTADERAKMLKDSEEVAKLHAEFAGEPDEEEEGDEEDETDLHYICFVKGTQEHDCHFYELDGRREGPIQHSEIENDVLDPKVFSVIKDYVQKTNSPYFSLVAITTTDDN
|
| Protein name |
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
|
| Main knot |
52 (47%)
|
| Global pLDDT |
88.86
|
| Species |
Fission yeast
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
226
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
91.4 | 5-218 | 214 | 1-4, 219-226 | 4 | 8 |
|
Model Sequence |
MWKPLENNPEVLEPYLRKLGILNASVFDLFTLDEIPEYIPRPVAALLLVLPSPGKFDKSQKESKLLSADSKEVVWFPQLVSNACGTVALVHAIANGNLSKQKYNSKFTKDLLKNAREQTADERAKMLKDSEEVAKLHAEFAGEPDEEEEGDEEDETDLHYICFVKGTQEHDCHFYELDGRREGPIQHSEIENDVLDPKVFSVIKDYVQKTNSPYFSLVAITTTDDN
|
| Domain |
Eukaryota
|
| Family |
Schizosaccharomycetaceae
|
| Species (Full Name) |
Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) (Fission yeast)
|
| Gene |
SPOG_00384
|
| PFAM codes |
PF01088
|
| InterPro codes |
 IPR001578, IPR036959, IPR038765
|
| PDB structures (whole Protein) |
-
|
S9VWF0