U1QEB8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Na+/proline symporter
Main knot	4₁ (57%)
Global pLDDT	91.85
Species	Halorubrum sp
UniProt	U1QEB8
Structure Prediction Model	AlphaFold v4: U1QEB8
PDB structures	-
Model length	323
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					92.0	56-290	235	1-55, 291-323	55	33

Model Sequence

MAETTLQLGIVAAYLLVALGIGLVAYRLSERTAEDYFLASRTLGTLVLVFTTFATLLSAFTFFGGPNLSFQAGPEWILVMGLMDGLIFGLLWYVVGYKQWLVGQAHGYVTLGEMLGERFGSRLLRVFVAGISLFWLVPYIMLQQQGAGTALVALTEGTVPYWVGAGGITLFMIVYVTISGMRGVAWTDTLQGLFMLGIVWLAAAWVLASVGGPGAATATLAETNPEFLSLGGGLYSPAFILSSAISIAFGVTMFPQVNQRFFVAKSAAVIKRTFTLWPVLVLLLFVPAFMLGAWAQGLGITAAAGENVLPLLLNEYTPAWFAA

Comments

ESM1

Categories voted by users:

Information

Protein name	Na+/proline symporter
Main knot	4₁ (56%)
Global pLDDT	90.39
Species	Halorubrum sp
UniProt	U1QEB8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	323
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.3	51-288	238	1-50, 289-323	50	35

Model Sequence

Comments

Domain	Archaea
Family	Halorubraceae
Species (Full Name)	Halorubrum sp. J07HR59
Gene	J07HR59_00768
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

U1QEB8F1

AF4

Model Sequence

ESM1

Model Sequence