U6DMT6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Cystine/glutamate transporter
Main knot	4₁ (75%)
Global pLDDT	82.95
Species	American mink
UniProt	U6DMT6
Structure Prediction Model	AlphaFold v4: U6DMT6
PDB structures	-
Model length	312
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.7	45-284	240	1-44, 285-312	44	28

Model Sequence

MVRKPVVSTISSGGYLQGNVNGKLPSLGGKEPPGQEKVVLKKKITLLRGISIIIGTIIGAGIFISPKGVLQNTGSVGMSLIIWTVCGVLSLFGALSYAELGTSIKKSGGHYTYILEVFGPLPAFVRVWVELLIIRPAATAVISLAFGRYILEPFFIQCEIPELAIKLITAVGITVVMVLNSMSVSWSARIQIFLTFCKLTAILIIIVPGVMQLIKGQTHHFKDAFSGRDASIMGLPLAFYYGMYAYAGWFYLNFVTEEVENPEKNIPLAICISMAIVTVGYVLTNVAYFTTISAEELLLSNAVAVHPLTMIM

Comments

ESM1

Categories voted by users:

Information

Protein name	Cystine/glutamate transporter
Main knot	4₁ (66%)
Global pLDDT	90.78
Species	American mink
UniProt	U6DMT6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	312
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					73.4	58-287	230	1-57, 288-312	57	25

Model Sequence

Comments

Domain	Eukaryota
Family	Mustelidae
Species (Full Name)	Neovison vison (American mink) (Mustela vison)
Gene	XCT
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

U6DMT6F1

AF4

Model Sequence

ESM1

Model Sequence