V2XPV2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Family integral membrane protein
Main knot	5₂ (42%)
Global pLDDT	86.72
Species	strain MCA 2997
UniProt	V2XPV2
Structure Prediction Model	AlphaFold v4: V2XPV2
PDB structures	-
Model length	329
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.5	9-294	286	1-8, 295-329	8	35

Model Sequence

MSTPTPLRSFLGGVGLSFPVHALLTLNGSVFGISGFLHRAVRGSKEGWTAVLGLVSGGVAIGLLEGRGPQLRMPELPVVLLSGLLVGVGTRMANGCTSGHMISGLSRLSKRSITATLTFFAAGVPVSRLLHSSLPPRYASEPFALDSYAKTLLAAQAIPLLLVSLLYLRTPSPPSSENTDPNAEKASSSTSRLLTFWATGVEFALALRLSELSDPTKVISFLLLPIHPAFDPSLMFLALGALPASFCLYHFCRGPEKPRLGGTWSISKGGLVDTKLVVGAAFFGVGWGISGICPGPALVNLGQALASGERIPVNVTWLAAFIAGGFVTG

Comments

ESM1

Categories voted by users:

Information

Protein name	Family integral membrane protein
Main knot	5₂ (38%)
Global pLDDT	88.44
Species	strain MCA 2997
UniProt	V2XPV2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	329
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.4	5-294	290	1-4, 295-329	4	35

Model Sequence

Comments

Domain	Eukaryota
Family	Marasmiaceae
Species (Full Name)	Moniliophthora roreri (strain MCA 2997) (Cocoa frosty pod rot fungus) (Crinipellis roreri)
Gene	Moror_7966
PFAM codes	PF04143, PF20398
InterPro codes	IPR007272, IPR046513
PDB structures (whole Protein)	-

V2XPV2F1

AF4

Model Sequence

ESM1

Model Sequence