V4MGW8F1

Oligopeptide transporter 2
AF6
Categories voted by users:
Information
Protein name
Oligopeptide transporter 2
Main knot
52 (67%)
Global pLDDT
84.75
Species
Saltwater cress
UniProt
Structure Prediction Model
AlphaFold v6:  V4MGW8
PDB structures
-
Structure in AlphaLasso
  V4MGW8: LS3++-N
Model length
736
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.35 59-684 626 1-58, 685-736 58 52 Knot
Model Sequence
MDAEKAANNDNNGHLDHERCPVEEVALVVPETDDPTLPVMTFRAWFLGLTSCVLLIFLNTFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHKLMGWEFSLNPGPFNIKEHVIITIFANCGVAYGGGDAYSIGAITVMKAYYKQSLSFICGLFIVLTTQILGYGWAGILRRYLVDPVDMWWPSNLAQVSLFRALHEKEHKSKGLTRMQFFLVALGASFLYYALPGYLFPILTFFSWVCWAWPKSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFIYIIVPVCYWKFNTFDARKFPIFSNQLFTSSGQKYDTTKILTPRFDLDINAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFNGRDIWRQTWSAVKTVKLDIHGKLMQRYKQVPEWWFYLLLLGSVAMSLLMSFVWKESVQLPWWGMLFAFAMAFIVTLPIGVIQATTNQQPGYDIIGQFIIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVASVVNLGVAWWMLESIQDICDIEGEHPNSPWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLIGAVLPVPVWAMSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWLVTGTIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHDLKWWGTEVDHCPLATCPTAPGIRAKGCPVF
Comments
AF4
Categories voted by users:
Information
Protein name
Oligopeptide transporter 2
Main knot
52 (66%)
Global pLDDT
84.97
Species
Saltwater cress
UniProt
Structure Prediction Model
AlphaFold v4:  V4MGW8
PDB structures
-
Structure in AlphaLasso
  V4MGW8: LS3++-N
Model length
736
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.0 131-679 549 1-130, 680-736 130 57
Model Sequence
MDAEKAANNDNNGHLDHERCPVEEVALVVPETDDPTLPVMTFRAWFLGLTSCVLLIFLNTFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHKLMGWEFSLNPGPFNIKEHVIITIFANCGVAYGGGDAYSIGAITVMKAYYKQSLSFICGLFIVLTTQILGYGWAGILRRYLVDPVDMWWPSNLAQVSLFRALHEKEHKSKGLTRMQFFLVALGASFLYYALPGYLFPILTFFSWVCWAWPKSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFIYIIVPVCYWKFNTFDARKFPIFSNQLFTSSGQKYDTTKILTPRFDLDINAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFNGRDIWRQTWSAVKTVKLDIHGKLMQRYKQVPEWWFYLLLLGSVAMSLLMSFVWKESVQLPWWGMLFAFAMAFIVTLPIGVIQATTNQQPGYDIIGQFIIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVASVVNLGVAWWMLESIQDICDIEGEHPNSPWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLIGAVLPVPVWAMSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWLVTGTIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHDLKWWGTEVDHCPLATCPTAPGIRAKGCPVF
Comments
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
Gene EUTSA_v10024512mg
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
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