V4MK39F1

Phytochrome
AF4
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Information
Protein name
Phytochrome
Main knot
41 (87%)
Global pLDDT
73.87
Species
Saltwater cress
UniProt
Structure Prediction Model
AlphaFold v4:  V4MK39
PDB structures
-
Model length
1164
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
83.1 123-423 301 1-122, 424-1164 122 741
Model Sequence
MVSGGGCETNGEAASSSSHRVEQSSRRTTNHLQEQAQSSPSKPLRSSQNKPQNHGGAGGTESMSKATQQFTLDARLHAVFEQSGESGKSFDYSQSLKSTTNGSSVPEQQITAYLSRIQRGGYIQPFGCLIAVDESTFTIIGYSENAREMLGLMSQSVPSIEEKSEILAIGTDLRFLFKPSSIVLLERAFVAREITLLNPVWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSIPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQSICLVGSTLRAPHGCHAQYMANMGSIASLALAVIINGNEEDGNGGGRNSMRLWGLVVCHHTSARSIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMDLVKCNGAAFLYRGKYYSLGVAPTENQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAALGDAVCGMAVAYITKSDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSQCQPWETAEMDAIHSLQLILRDSFKESEAMEAKAAASGAVQPHGEDGAEQGMVEIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVDEAMGKSLVGDLIHKEYEEAVDRLLSCALKGDEGKNVEVKLKTFGAELQGKAVFVVVNACSSKDYLNNIVGVCFIGQDVTSHKTVMDKFINIQGDYKAIIHSPNPLIPPIFASDENTCCLEWNTAMENLTGWPRSEVIGKLLVKEVFGSCCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRRGKFIQALLTMNKRVNPNGEVIGAFCFLQIPSLELQQALEIQRRQESECFSRGKELAYIIQVIKNPLSGLRFTSSLLEATDLSEDQKQYLETSVSCEKQISKIVGNMDAKSIEDGSFQLERTEFIIGSVINAVVSQAMLVVRERNLQLIRNIPMEIKSMVVYGDQIRIQQVLADFLLSIVRYAPTEGSVELHVHPVLKQMADGFSAIRIEFRMACAGEGVPPEKVQDMFHSSRWTSHEGLGLSVCRKILKLMNGEVQYIRKFERSYFLILIELPVPLMPS
Comments
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum)
Gene EUTSA_v10024253mg
PFAM codes  PF00360,  PF00512,  PF00989,  PF01590,  PF02518,  PF08446
InterPro codes  IPR000014,  IPR001294,  IPR003018,  IPR003594,  IPR003661,  IPR005467,  IPR012129,  IPR013515,  IPR013516,  IPR013654,  IPR013767,  IPR016132,  IPR029016,  IPR035965,  IPR036890,  IPR043150,  IPR044767
PDB structures (whole Protein) -