V5FDC2F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (52%)
Global pLDDT
94.28
Species
Paecilomyces variotii
UniProt
Structure Prediction Model
AlphaFold v4:  V5FDC2
PDB structures
-
Model length
250
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
95.5 18-244 227 1-17, 245-250 17 6
Model Sequence
MASNPDAPTTSKAFVPLENNPEVMSHLVHKLGLSRSFGFTDVYSIDEPDLLAFVPRPAHALLLVFPVSPTYEASRVAEDSPLPEYTGSGPSEPVMWFKQTIRNACGLIGLLHAVSNGEPRKNITPGSDLDQLLKTAESLPPIQRADLLYESKALESAHADAAKLGDTEAPQAEDNVDLHFVAFVKGDNGRLWELDGRRKGPLERGQLADDEDVLSEKALDLGVRRFLRIEKEGGNPDLRFSLVSLGPHFD
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (72%)
Global pLDDT
91.13
Species
Paecilomyces variotii
UniProt
Structure Prediction Model
PDB structures
-
Model length
250
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
83.8 18-244 227 1-17, 245-250 17 6
Model Sequence
MASNPDAPTTSKAFVPLENNPEVMSHLVHKLGLSRSFGFTDVYSIDEPDLLAFVPRPAHALLLVFPVSPTYEASRVAEDSPLPEYTGSGPSEPVMWFKQTIRNACGLIGLLHAVSNGEPRKNITPGSDLDQLLKTAESLPPIQRADLLYESKALESAHADAAKLGDTEAPQAEDNVDLHFVAFVKGDNGRLWELDGRRKGPLERGQLADDEDVLSEKALDLGVRRFLRIEKEGGNPDLRFSLVSLGPHFD
Comments
Domain Eukaryota
Family Thermoascaceae
Species (Full Name) Byssochlamys spectabilis (strain No. 5 / NBRC 109023) (Paecilomyces variotii)
Gene PVAR5_3874
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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