V6DHZ5F1

Relaxase
AF4
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Information
Protein name
Relaxase
Main knot
41 (88%)
Global pLDDT
74.79
Species
Ligilactobacillus salivarius
UniProt
Structure Prediction Model
AlphaFold v4:  V6DHZ5
PDB structures
-
Model length
677
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
71.4 25-177 153 1-24, 178-677 24 500
Model Sequence
MTETPDIIYTQQFVAANVQYLDYSEREEAVDLLNDFDLETGESNIQHDVDENLAGYLGYTDRKAATKLEDGLTGVYPTFTQDSLNLTYKQHHELADKIREAQKNKSMLWQGVVSFNPDFLERAKLYDPETGVVNQRAIKRAVQKAIPEMLKQEELNVPETFWWADVHLNTNHVHVHIGISQTKNTRPLKFGEPKGTFQAKSLKKIKSIVHREVEDKVSRKQDINLEKKIDELKKDVVDQLKENLQQQQQQKMLEQIWHALPKYKDKRRWRASNNSYDFREAKLLTGKLVDDLLKTDLNQDYEKYLSAIKQKDSDNREKYGQNIPDSIPKKQKDLHDYLMNRVFDELREVDSVSTKSNFSERVKWLGIEGNNELIEVLSKQLKNTKSDIKAKKLKKEIGIRKYYVGVLIKENKNKNYLNQISELKEKGLKNNVQDYLINDLQEKYRLGVLQLISRNKRDNDNKTEYQKLVNKHADVSQLSVKKINEETVAQKNQYLDEWLKVVKNTKDPNVQIYLKNQGLENVNLSEYVDLQKRIMQAKLAIKDNNKKYANNVSLRNQKNGKLFKQLKKDYEDLKNINSKIDLNQTQIRLNQTSNSKNVSRQKNESKSLAKKENTERKPTNSVSPRLLSKLSSALTSVKKEGQERINALRRNLDKEDDFEKQDRIDEIETETGRSMER
Comments
Domain Bacteria
Family Lactobacillaceae
Species (Full Name) Ligilactobacillus salivarius cp400
Gene LSCP400_00921
PFAM codes  PF18555
InterPro codes  IPR041073
PDB structures (whole Protein) -