V6MIH7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (81%)
Global pLDDT	92.09
Species	Brevibacillus panacihumi
UniProt	V6MIH7
Structure Prediction Model	AlphaFold v4: V6MIH7
PDB structures	-
Model length	274
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.1	200-242	43	1-199, 243-274	199	32

Model Sequence

MAHERITSAQNPLVKRLQLLLERKGREESGSYLIEGAHLVEEALNSGAAVTTILYDSERELNAACRQALTNISPDVHVVAASEAVLAKLSETKSPQGIVAVVKKNQHNWEEWTEQLLQAKQDVLLLFLDELQDPGNLGTILRTAEAAGVDGVVLGRGSVDLYNGKVVRATMGAIFRLPVFTQDLTVAADQWRQKGGRMLCSTLRENSRSYDSVDYSGKVAIVIGNEGRGVSDEMITQADELVHIPIYGQAESLNAAVAAGLLVYEARRKKDRSH

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (80%)
Global pLDDT	95.98
Species	Brevibacillus panacihumi
UniProt	V6MIH7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	274
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.6	35-124	90	1-34, 125-274	34	150

Model Sequence

Comments

Domain	Bacteria
Family	Paenibacillaceae
Species (Full Name)	Brevibacillus panacihumi W25
Gene	T458_08210
PFAM codes	PF00588, PF08032
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

V6MIH7F1

AF4

Model Sequence

ESM1

Model Sequence