W1XDK8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Methionine adenosyltransferase (EC 2.5.1.6)
Main knot	3₁ (70%)
Global pLDDT	96.04
Species	Escherichia coli
UniProt	W1XDK8
Structure Prediction Model	AlphaFold v4: W1XDK8
PDB structures	-
Model length	381
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.6	12-263	252	1-11, 264-381	11	118

Model Sequence

MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAA

Comments

ESM1

Categories voted by users:

Information

Protein name	Methionine adenosyltransferase (EC 2.5.1.6)
Main knot	3₁ (69%)
Global pLDDT	88.07
Species	Escherichia coli
UniProt	W1XDK8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	381
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.8	12-263	252	1-11, 264-381	11	118

Model Sequence

Comments

Domain	Bacteria
Family	Enterobacteriaceae
Species (Full Name)	Escherichia coli DORA_A_5_14_21
Gene	Q609_ECAC00144G0001
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

W1XDK8F1

AF4

Model Sequence

ESM1

Model Sequence