W4EXN5 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	YqhG
Main knot	3₁ (50%)
Global pLDDT	87.29
Species	Viridibacillus arenosi
UniProt	W4EXN5
Structure Prediction Model	AlphaFold v4: W4EXN5
PDB structures	-
Model length	259
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.9	103-259	157	1-102,	102	0

Model Sequence

MFPQQVHGYLRNFFLENDCHIVNESDHYITVQLTIDMDKRIMNRPFYWRYLESTNGVPCPAQLTLITDQTKLDDNIKGEVVHFGSPRLSQLFQATKELGAFVQMFENVNHLETKTILTPWLAVNYKVSYYSDQTKEMLNSFGLNLMTGQLLDGFQESLSEVDLVPTMPDNAFELPYIIKPIRALERLNVAIETIVQQDDHTWAEEANKRWQKAQQVLEYFYDGVEDKPESYEMEKQALEEQYDPRIKIEVINGGLFYLK

Comments

ESM1

Categories voted by users:

Information

Protein name	YqhG
Main knot	3₁ (50%)
Global pLDDT	92.37
Species	Viridibacillus arenosi
UniProt	W4EXN5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	259
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.2	103-258	156	1-102, 259-259	102	1

Model Sequence

Comments

Domain	Bacteria
Family	Planococcaceae
Species (Full Name)	Viridibacillus arenosi FSL R5-213
Gene	C176_11429
PFAM codes	PF11079
InterPro codes	IPR024562
PDB structures (whole Protein)	-

W4EXN5F1

AF4

Model Sequence

ESM1

Model Sequence