W7QDJ0F1

OPT family oligopeptide transporter
AF4
Categories voted by users:
Information
Protein name
OPT family oligopeptide transporter
Main knot
52 (52%)
Global pLDDT
85.26
Species
Catenovulum agarivorans
UniProt
Structure Prediction Model
AlphaFold v4:  W7QDJ0
PDB structures
-
Model length
654
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.3 86-604 519 1-85, 605-654 85 50
Model Sequence
MPIHQQLTNLFKHPEFSSRTLVIAVLITLCLTAANAYIGLMVGMTVSASIPAAALSMAILSWFKNSNIQQSNMVQTSASAGEALAAGVIFITPALVITNAWEQYHYWQCFLIALSGGLLGTIFTIPLRNTFIVQQSLPYPEGVATAKILQSGFNNQVKTGFASVGTRHIMQATGIGAVYKLTADGFGMMAQKLTVLIPWSQNNLLFHASFQLSPALLAIGYILGIGIAAQVFIGGLVTTLLGIPLQLVFNHSEWLTNSPQLADWSVNELQQLAAQIWQQNRSIGVGTILVGAIYTFIKLVKPLFYSIKQSVISFKLQHNSGLSEQQDLPNIWMLMCIPLCLIAPSLIIALQFNNIVDAILIGLLSFVLLFAFAFVFSSVAGYMAGVVGSSNNPVSAVTICTVLLSAILLYYLSLWFEPWAKVAPIAVLFIAAVVCCSAAIAGDTLQDLKCGHEVNSAPWKQQCFQILGVVLAATILPLILSLLDTAYGIGRSVQHGITPLAAPQAGLMAELTRTIFDQTINLFYLGLGVVFGIIILLFDALLHLRKAKFKLHILAIAIGMYLPFALVATLFAGGLISAILSFKQRNSEDEHKSTGILIASGLVTGEALMGVMLAISATFIMPLPTEISAAQYTGLFGFALVALYLYKRARSKPF
Comments
Domain Bacteria
Family Alteromonadaceae
Species (Full Name) Catenovulum agarivorans DS-2
Gene DS2_10152
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -