X0WMV1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ornithine carbamoyltransferase
Main knot	3₁ (67%)
Global pLDDT	95.92
Species	marine sediment
UniProt	X0WMV1
Structure Prediction Model	AlphaFold v4: X0WMV1
PDB structures	-
Model length	259
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.5	151-233	83	1-150, 234-259	150	26

Model Sequence

AHDLKRKHIRRETHRVLDGMTLHMLFYNTSLRTRNSFEAGMTQLGGHAHFLQPGAVYTPALKGEEKAYSTERISDVARVLAEMGDAIAIRIYGKPTGWEYGKGDRIVREFAEWSRVPVINMEDDMYHPCQALADVMTMQEKLGHNLQGKKFVMSWAYSSSVAKPLAVPQSAIVSAAMMGMDVTLAHPERLDLDPEILKATESLAKKNGGAFSIIHDMDEAFKDADVVYSKAWTVQPTDGSGIMDEAKAKPIFEANKDWI

Comments

ESM1

Categories voted by users:

Information

Protein name	Ornithine carbamoyltransferase
Main knot	3₁ (73%)
Global pLDDT	88.36
Species	marine sediment
UniProt	X0WMV1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	259
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.0	151-233	83	1-150, 234-259	150	26

Model Sequence

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	marine sediment metagenome
Gene	S01H1_51781
PFAM codes	PF00185, PF02729
InterPro codes	IPR006131, IPR006132, IPR036901
PDB structures (whole Protein)	-

X0WMV1F1

AF4

Model Sequence

ESM1

Model Sequence