X1WHS9F1

Si:ch73-181m17.1
AF4
Categories voted by users:
Information
Protein name
Si:ch73-181m17.1
Main knot
Unknown (58%)
Global pLDDT
70.07
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v4:  X1WHS9
PDB structures
-
Model length
2316
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
70.6 779-1604 826 1-778, 1605-2316 778 712
Model Sequence
MRFPISLCVLLLLLVNDVMNISVSTVTPQTALTELSNPSVPPPTTTTDVRTPVSEPCTQYSILDDGWRGLQVLGHNSPFNVHDDTLVEWSGWYRLYLNGTSAQLSEWCVSYSECGGGTGLYLNASHPKLEDGVVTRDVLGMSSGWSFSQCGNYRSNSIQVKACPGDYYVYELVKPSTFMPRPTYCTVAFNNISNDPCYNYESLDRPWRATNESGFFICDGAFPWNGWYRLFCNGMNIRMPESCIGANGCNTQNSLSLNGPHPQIEDGVVIRELCGSVGFGCCAFRSTPIRVKACPGDYYVYELSDPSFPCSGYCIDVSTLSQLPTTSPAAITGSSITLINSDYDPCYNYNSLDNHWRSTHNNWLADEHAYDDSRVHWDGWYRLFINGSSAEIPERCFSHMSCGGYVSLWLGDPHPQLEDGVVTRKVYGSSYHQCNNYRSDPIQVKACPGNYYVYKLIRPKLTIPAPVYCADVRTPVSEPCTQYSILDDGWRGLQVLGHNSPYNVHDDTLVEWSGWYRLYLNGTSAQLSEWCVSYSECGGGTGLYLNASHPKLEDGVVTRDVLGMSSGWSFSQCGNYRSNSIQVKACPGDYYVYELVKPSTFMPRPTYCTVAFNNISDDPCYNYESLDRPWRATNESGFFVCDGAFTWNGWYRLFCNGMNIRMPESCIGANGCNTQNSLSLNGPHPQIEDGVVIRELCGSVGFGCCAFRSTPIRVKACPGDYYVYELSDPSFPCSGYCIDVRTLSQLPTTSPAAITGSSITLNYDPCYNYNSLDNYWRTTYNNWFADEHAHDDSRVHWDGWYRLFINGSSAEIPEWCFTYMSCGGYVSLWLGDPHPQLEDGVVTRKVYGSIYNQCNYRSDPIQVKACPGNYYVYKLIRPKLTMPAPVYCAVSFNTSNTDPCYNYTNLDEPWRASNNSYFGSVCDYNVVWNGWYRLFYNAQSVQMPDSCVSNGMCGSNQPLWLNGSHPSLEDGVVTRQVCSPTWTDCCGYTSHPIQVKACPGNYYVYHLTKPTFCSSYCAEVTEISNILASTTAVTISTQESPIATSEADPFDPCYNYTVLDNYWRSVNNTQFSSIRCDMSVNWNGWYRLYISGQSAQMPDTCVNELSCSTHAPLWLNGEHPHVEDGVVTRSICGHWNNDCCYFHSNPIQVKACPGSYYVYEFVSPSFCFGTYCAEVTTSSSDPCFGYSVIDENWRDLRQDYYNYYSFYGHDDTLVDWKGWYRLYLNGKNAQLSEWCVTQSGCGGDIALFLNGSHPRLEDGVVTREVLGTWSSSSWVWWWWWYTWSFDLSKQCGYYKSSSIQVKACPGDYYVYELVRPNASMIRPAYCTVAFDSINNDPCYNYESLDRPWRATNESGFSVSDEFFSWNGWYRLFYNGMNIQMSESCIGRYVCNAFSGLSLKGPHPQIDDGVVIREVCGGEMFGCCAFRLTAIRVKACPGDYYVYEFVKPLTYSNSAYCTDISTVTEAFSSTSPALIIGSSMSTFNRDYDPCNDYNILDNHWRSTLNYRAQYYFDDSRVEWQGWYRLYINGISAQMPEWCFIYMSCGGFSSLWLGGPHPQLEDGVVIREVYGSVNDQCSSYQSNPIQVKACTGNYYVYEFKKPKISIPAPTYCADPFTTPSVDPCYNYNSLDEPWRATDHPYYDKYYYYNVMCDYNAWSWNGWYRLFYNGQSVQMPESCVSAGMCGTNYPLWLNGSHPRLEDGVVTREVCGSSWSGCCSFKSHPIQVKACPGNYYVYEFVRPQLCSAYCADISTINTTTTTTNISSGPFYPFGFGDTETNRSDDGISSVIYFRRPFIFFGQTYNQVYISNNGFLTFDWPWYSYYPYQFPGYGGQDIIAPLWADIDNRFTGVISYQQYTYGSVISNATQDINLYFPDLRFSATWVFVVTWDRVPYYPISRTETSFQVVFISDGHLSFILMNYGKVAPTHRFVQAGYDTNSSRCYFSITSSLQNETTNLTYSSNVNVPGRWAFRTDHRSRCCQFNEDHCSEFNCTENEHCKKKHGVYGCSCKKNHHRSHPSAADSFDFTETCENSHGSISLSRCQLFDAGFPSDILHLNDPSCRGTVRDGQVEFYFDNNEHICGTSLTANGTHIIYENFIKGEPNTTGLLVSRAKVLKLSFSCVYLQTQTLSMDINPLESKVHKTLPAGQGTYRVRMIPYQDAEFLHPFTGNVAKEVSKRIFVEVRVDGVDDRQFASVIDTCWATPVNDPHDSLRWDLIVDRCPNPNDDTVELVENGDSMVSRFSFEMFIFTANSTKVYLHCAIHLCLLIDNHCSVNCDSEHHRRQARSADIHDSAHISLGPFMWSENDKDLPVPRQVPVA
Comments
AF1-Artifact
Categories voted by users:
Information
Protein name
Si:ch73-181m17.1
Main knot
Unknown (96%)
Knot fingerprint
K Unknown(x8) 86 814(x4) 76(x24) 61(x7) 41(x2) 31
Global pLDDT
70.07
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v1:  X1WHS9
PDB structures
-
Model length
2316
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
70.5 850-1529 680 1-849, 1530-2316 849 787 Knot
70.0 755-1499 745 1-754, 1500-2316 754 817 Slipknot
69.9 754-1531 778 1-753, 1532-2316 753 785 Slipknot
70.3 817-1553 737 1-816, 1554-2316 816 763 Slipknot
70.2 844-1533 690 1-843, 1534-2316 843 783 Slipknot
70.1 846-1552 707 1-845, 1553-2316 845 764 Slipknot
69.9 874-1551 678 1-873, 1552-2316 873 765 Slipknot
Model Sequence
MRFPISLCVLLLLLVNDVMNISVSTVTPQTALTELSNPSVPPPTTTTDVRTPVSEPCTQYSILDDGWRGLQVLGHNSPFNVHDDTLVEWSGWYRLYLNGTSAQLSEWCVSYSECGGGTGLYLNASHPKLEDGVVTRDVLGMSSGWSFSQCGNYRSNSIQVKACPGDYYVYELVKPSTFMPRPTYCTVAFNNISNDPCYNYESLDRPWRATNESGFFICDGAFPWNGWYRLFCNGMNIRMPESCIGANGCNTQNSLSLNGPHPQIEDGVVIRELCGSVGFGCCAFRSTPIRVKACPGDYYVYELSDPSFPCSGYCIDVSTLSQLPTTSPAAITGSSITLINSDYDPCYNYNSLDNHWRSTHNNWLADEHAYDDSRVHWDGWYRLFINGSSAEIPERCFSHMSCGGYVSLWLGDPHPQLEDGVVTRKVYGSSYHQCNNYRSDPIQVKACPGNYYVYKLIRPKLTIPAPVYCADVRTPVSEPCTQYSILDDGWRGLQVLGHNSPYNVHDDTLVEWSGWYRLYLNGTSAQLSEWCVSYSECGGGTGLYLNASHPKLEDGVVTRDVLGMSSGWSFSQCGNYRSNSIQVKACPGDYYVYELVKPSTFMPRPTYCTVAFNNISDDPCYNYESLDRPWRATNESGFFVCDGAFTWNGWYRLFCNGMNIRMPESCIGANGCNTQNSLSLNGPHPQIEDGVVIRELCGSVGFGCCAFRSTPIRVKACPGDYYVYELSDPSFPCSGYCIDVRTLSQLPTTSPAAITGSSITLNYDPCYNYNSLDNYWRTTYNNWFADEHAHDDSRVHWDGWYRLFINGSSAEIPEWCFTYMSCGGYVSLWLGDPHPQLEDGVVTRKVYGSIYNQCNYRSDPIQVKACPGNYYVYKLIRPKLTMPAPVYCAVSFNTSNTDPCYNYTNLDEPWRASNNSYFGSVCDYNVVWNGWYRLFYNAQSVQMPDSCVSNGMCGSNQPLWLNGSHPSLEDGVVTRQVCSPTWTDCCGYTSHPIQVKACPGNYYVYHLTKPTFCSSYCAEVTEISNILASTTAVTISTQESPIATSEADPFDPCYNYTVLDNYWRSVNNTQFSSIRCDMSVNWNGWYRLYISGQSAQMPDTCVNELSCSTHAPLWLNGEHPHVEDGVVTRSICGHWNNDCCYFHSNPIQVKACPGSYYVYEFVSPSFCFGTYCAEVTTSSSDPCFGYSVIDENWRDLRQDYYNYYSFYGHDDTLVDWKGWYRLYLNGKNAQLSEWCVTQSGCGGDIALFLNGSHPRLEDGVVTREVLGTWSSSSWVWWWWWYTWSFDLSKQCGYYKSSSIQVKACPGDYYVYELVRPNASMIRPAYCTVAFDSINNDPCYNYESLDRPWRATNESGFSVSDEFFSWNGWYRLFYNGMNIQMSESCIGRYVCNAFSGLSLKGPHPQIDDGVVIREVCGGEMFGCCAFRLTAIRVKACPGDYYVYEFVKPLTYSNSAYCTDISTVTEAFSSTSPALIIGSSMSTFNRDYDPCNDYNILDNHWRSTLNYRAQYYFDDSRVEWQGWYRLYINGISAQMPEWCFIYMSCGGFSSLWLGGPHPQLEDGVVIREVYGSVNDQCSSYQSNPIQVKACTGNYYVYEFKKPKISIPAPTYCADPFTTPSVDPCYNYNSLDEPWRATDHPYYDKYYYYNVMCDYNAWSWNGWYRLFYNGQSVQMPESCVSAGMCGTNYPLWLNGSHPRLEDGVVTREVCGSSWSGCCSFKSHPIQVKACPGNYYVYEFVRPQLCSAYCADISTINTTTTTTNISSGPFYPFGFGDTETNRSDDGISSVIYFRRPFIFFGQTYNQVYISNNGFLTFDWPWYSYYPYQFPGYGGQDIIAPLWADIDNRFTGVISYQQYTYGSVISNATQDINLYFPDLRFSATWVFVVTWDRVPYYPISRTETSFQVVFISDGHLSFILMNYGKVAPTHRFVQAGYDTNSSRCYFSITSSLQNETTNLTYSSNVNVPGRWAFRTDHRSRCCQFNEDHCSEFNCTENEHCKKKHGVYGCSCKKNHHRSHPSAADSFDFTETCENSHGSISLSRCQLFDAGFPSDILHLNDPSCRGTVRDGQVEFYFDNNEHICGTSLTANGTHIIYENFIKGEPNTTGLLVSRAKVLKLSFSCVYLQTQTLSMDINPLESKVHKTLPAGQGTYRVRMIPYQDAEFLHPFTGNVAKEVSKRIFVEVRVDGVDDRQFASVIDTCWATPVNDPHDSLRWDLIVDRCPNPNDDTVELVENGDSMVSRFSFEMFIFTANSTKVYLHCAIHLCLLIDNHCSVNCDSEHHRRQARSADIHDSAHISLGPFMWSENDKDLPVPRQVPVA
Comments
Domain Eukaryota
Family Danionidae
Species (Full Name) Danio rerio
PFAM codes  PF00100,  PF06119
InterPro codes  IPR001507,  IPR003886,  IPR042235
PDB structures (whole Protein) -
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