X5MK72F1

23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB
AF4
Categories voted by users:
Information
Protein name
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB
Main knot
31 (91%)
Global pLDDT
80.03
Species
Candidatus Phaeomarinobacter
UniProt
Structure Prediction Model
AlphaFold v4:  X5MK72
PDB structures
-
Model length
321
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.5 251-292 42 1-250, 293-321 250 29
Model Sequence
MSDDRNSGPKRPASGRSGRGGNAGGDRNRSNRRGSGPQRSGAKRTGGKGGEGRSNAGGSGRQHAGRPRQASQQIVDGPDWLYGAHAVRAALMNPKRRLLRLIATENGSETIAEPARQRGLQIEKADSKDMDRMFAPGTVHQGIALRVAPLPDPVLADILGASNAADENGEPTKPLVILDQVTDPQNVGAVLRSAAVFGARAVIVTRRNSPPITGTLAKAASGAVEQMPLVQVPNVAQAIAVLQSEGWFTVGLEGTGDKSLAQMDLTGKIAIIMGAEGAGLRRLTAERCDLLAKIPGEPGFASLNVSNATAVALYEISRQRG
Comments
ESM1
Categories voted by users:
Information
Protein name
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB
Main knot
31 (83%)
Global pLDDT
88.62
Species
Candidatus Phaeomarinobacter
UniProt
Structure Prediction Model
PDB structures
-
Model length
321
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
67.7 251-292 42 1-250, 293-321 250 29
Model Sequence
MSDDRNSGPKRPASGRSGRGGNAGGDRNRSNRRGSGPQRSGAKRTGGKGGEGRSNAGGSGRQHAGRPRQASQQIVDGPDWLYGAHAVRAALMNPKRRLLRLIATENGSETIAEPARQRGLQIEKADSKDMDRMFAPGTVHQGIALRVAPLPDPVLADILGASNAADENGEPTKPLVILDQVTDPQNVGAVLRSAAVFGARAVIVTRRNSPPITGTLAKAASGAVEQMPLVQVPNVAQAIAVLQSEGWFTVGLEGTGDKSLAQMDLTGKIAIIMGAEGAGLRRLTAERCDLLAKIPGEPGFASLNVSNATAVALYEISRQRG
Comments
Domain Bacteria
Family Parvibaculaceae
Species (Full Name) Candidatus Phaeomarinobacter ectocarpi
Gene BN1012_Phect91
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR004441,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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