X6P1H9F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (87%)
Global pLDDT
88.68
Species
Reticulomyxa filosa
UniProt
Structure Prediction Model
AlphaFold v4:  X6P1H9
PDB structures
-
Model length
265
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.4 39-255 217 1-38, 256-265 38 10
Model Sequence
MSQEEAKEENKTNTEKKPEKVEKGDETEEVEEGNWLPLESNPEVLNDFARRMGLPEDYAFHEVFGFDEETLAFTPQPVLAAVLLFPSSKNIKAFKAKQRVDIEANGQVLDNSLFYLYQHDNIGNACGTIAMIHCLSNSVPLSDGPLSTFTKSTKDMNWIDRGWALLKAKDIQEVSDETAASEANQTDTPERTDDTDGHFIAFVQKSGMLFELDGRKKFPINHGETSEETFLHDVVKVVKEKFMALEPNNVNFNLMTLSQEQAEED
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (83%)
Global pLDDT
91.25
Species
Reticulomyxa filosa
UniProt
Structure Prediction Model
PDB structures
-
Model length
265
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
76.7 39-255 217 1-38, 256-265 38 10
Model Sequence
MSQEEAKEENKTNTEKKPEKVEKGDETEEVEEGNWLPLESNPEVLNDFARRMGLPEDYAFHEVFGFDEETLAFTPQPVLAAVLLFPSSKNIKAFKAKQRVDIEANGQVLDNSLFYLYQHDNIGNACGTIAMIHCLSNSVPLSDGPLSTFTKSTKDMNWIDRGWALLKAKDIQEVSDETAASEANQTDTPERTDDTDGHFIAFVQKSGMLFELDGRKKFPINHGETSEETFLHDVVKVVKEKFMALEPNNVNFNLMTLSQEQAEED
Comments
Domain Eukaryota
Family Reticulomyxidae
Species (Full Name) Reticulomyxa filosa
Gene RFI_05723
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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