Status Status Details Main knot Main knot (knot pull) Project name Input data Model lengths Last status changed Job submitted Key What to compute? Closure Number of random closures Accuracy Trajectory (Knot Pull) Search Identical
FINISHED 2023-12-19 23:21:07+01:00: AF-Q4TTC9-F1 - main chain knotted ... 51 (87%) None Test AF-Q4TTC9-F1.cif
 185 2023-12-19 23:21:16+01:00 2023-12-19 23:18:23+01:00 dd14c82e3e0b45 Full matrix only if full chain is knotted close by statistical methods 100 Detailed Yes Yes: Identity: 70%

Results for job AF-Q4TTC9-F1

Topology type: KNOTTED

Information
Main knot 51 (87%)
Knot fingerprint K 51 31
Global pLDDT 66.6

Artifact check
Topological complexity Knot with a low (5) number of crossings
pLDDT Knot-core Confident (77.3); 71.1% has >70 pLDDT; 5.2% has <50 pLDDT
pLDDT N-end knot-core border Confident (79.0); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT C-end knot-core border Confident (81.2); 81.8% has >70 pLDDT; 0.0% has <50 pLDDT
C-alpha clashes No clashes
Knot map

Knot cutoff: 48 %


Knotting data interpretation
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main knot
75.8 72-168 96 1-71, 169-185
76.2 93-143 50 1-92, 144-185
Model Sequence
MGFKKDVQFLGNLPVSEKLIISSGPIIVYTTHGCKINNFRDKFEIMHGWSPLLLSTAKCFTRLIISNMQEPVCAPIIWKLTVNVGVDVQLFTHSSTDPIIRFIENCTVNDRKISSEEIPDFSTAAANIFLADMKSFSETVDLRINTDTTIFNEKIDMIVLKHGASITINRIAQTSGGSTSPPTFD
Knot Pull Trajectory
Identical Structures in AlphaKnot
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
Q4TTC9
97.3 %
185
N/A
N/A
Caeel
A0A2P4VEM9
73.8 %
180
51 (92%)
01 (89%)
Caenorhabditis vulgaris
A0A6A5H4H2
73.8 %
180
51 (87%)
01 (96%)
Caenorhabditis vulgaris
A0A261BSY1
73.5 %
180
51 (88%)
01 (93%)
Caenorhabditis latens
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