AlphaKnot 2.0: Knots on AlphaFold generated structures

Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 1 - 100. Applied filters: Categories: AF4

Search results C-end knot depth between 250 and 251

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Knot type	Category	Uniprot	Organism	pLDDT knotcore	Protein name
3₁	AF4	A0A7Y9E7I5-F1	Nocardioides panaciterrulae	97.4	tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
3₁	AF4	A0A2S3YGZ2-F1	Sinorhizobium americanum	93.8	Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (EC 3.4.11.10) (Leucyl aminopeptidase)
3₁	AF4	A0A7R9BK76-F1	Notodromas monacha	93.7	PHF5-like protein
3₁	AF4	A0A7Y4WJP9-F1	Planctomycetes bacterium	93.2	tRNA 2-selenouridine(34) synthase MnmH
3₁	AF4	A0A124FF89-F1	Thermococcus sibiricus	92.7	Putative type II restriction endonuclease
3₁	AF4	F2PRG0-F1	Horse ringworm fungus	92.7	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)
3₁	AF4	A0A6J2USZ4-F1	Milkfish	92.5	Carbonic anhydrase 6 (EC 4.2.1.1) (Carbonate dehydratase VI) (Carbonic anhydrase VI)
3₁	AF4	A0A1Q3VZR5-F1	Afipia sp	92.1	tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
3₁	AF4	A0A3B4CR56-F1	Red-bellied piranha	91.9	Carbonic anhydrase 6 (EC 4.2.1.1) (Carbonate dehydratase VI) (Carbonic anhydrase VI)
3₁	AF4	A0A232LMQ6-F1	Elaphomyces granulatus	91.8	18S rRNA aminocarboxypropyltransferase (EC 2.5.1.-)

Showing 1 to 10 of 100 entries

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