Status Status Details Main knot Main knot (knot pull) Project name Input data Model lengths Last status changed Job submitted Key What to compute? Accuracy Trajectory (Knot Pull) Search Identical
FINISHED 2024-01-31 14:36:43: AF-P73136-F1 - trajectory generated ... 51 (90%) 51(A)[-6(+), -8(+), -10(+), -2(+), -4(+)](A) Recomputed from: P73136-F1-AFv4 AF-P73136-F1.cif
2024-01-31 14:36:43 2024-01-31 14:30:58 404cf2e070346a Knot core only Quick Yes Yes: Identity: 70%

Results for job AF-P73136-F1


Topology type: KNOTTED

Information
Main knot 51 (90%)
Knot fingerprint K 51
Global pLDDT 87.9

Artifact check
Topological complexity Knot with a low (5) number of crossings
pLDDT Knot-core Very high (98.2); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT N-end knot-core border Very high (98.4); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT C-end knot-core border Very high (97.9); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
C-alpha clashes No clashes
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Slipknot tails Slipknot loops Main knot
98.2 43-102 59 1-42, 103-112 42 10 Knot
Model Sequence
MKNKLGIILVCNCLFSLFINRGVGAEETINIGDCSFNGHPLYGKIQLVGSFPDLTVQVVSSFPDLKVQLVESFPNQCGQWQIVTSFPDTKVQIVESFPDVKIQYVDSFPGLP
Knot Pull Trajectory
Identical Structures in AlphaKnot
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
P73136
99.8 %
112
51 (91%)
72 (91%)
Synechocystis sp.
A0A6P1VF52
93.0 %
112
51 (89%)
01 (95%)
Synechocystis sp
A0A068N1S3
70.9 %
110
51 (91%)
01 (90%)
strain PCC 6714
A0A660Z1L2
76.3 %
104
51 (92%)
01 (96%)
Ignavibacteriae bacterium
A0A352LL24
81.5 %
102
51 (89%)
01 (95%)
Sutterella sp
A0A7Y2K635
75.5 %
113
51 (90%)
01 (95%)
Ignavibacteriaceae bacterium
A0A524Q268
75.7 %
99
51 (92%)
01 (90%)
Chrysiogenales bacterium
A0A4R9LN45
77.0 %
105
51 (88%)
01 (93%)
Leptospira ilyithenensis
A0A7X9DVR2
77.0 %
106
51 (92%)
01 (94%)
Myxococcales bacterium
A0A7Y2CEH5
73.8 %
108
51 (90%)
01 (96%)
Marinicaulis sp
A0A497CWM3
74.7 %
92
51 (87%)
01 (85%)
Bacteroidetes bacterium
A0A6G0AH96
73.2 %
103
51 (90%)
01 (90%)
Chlorobi bacterium
A0A7Y5FDH9
73.2 %
103
51 (90%)
01 (91%)
Ignavibacteriaceae bacterium
A0A6M8VIY0
73.2 %
103
51 (91%)
01 (88%)
Ignavibacteriae bacterium
A0A7Y8J6Z9
73.0 %
114
51 (92%)
01 (91%)
Ignavibacteriaceae bacterium
A0A7C4KSZ9
75.8 %
106
51 (90%)
01 (90%)
Deltaproteobacteria bacterium
A0A3M1XWA8
79.7 %
102
51 (90%)
01 (95%)
Bacteroidetes bacterium
A0A1G0SWK8
73.4 %
111
51 (92%)
01 (95%)
Ignavibacteria bacterium
A0A6M8VEA3
73.2 %
119
51 (94%)
01 (95%)
Ignavibacteriae bacterium
A0A2E1XDU6
73.0 %
97
51 (88%)
01 (95%)
Parvularcula sp
A0A7C3ZNF1
74.4 %
95
51 (89%)
01 (91%)
Planktothricoides sp
A0A523NA91
77.2 %
85
51 (73%)
01 (84%)
Ignavibacteria bacterium
A0A2N0BBR6
70.3 %
92
51 (89%)
01 (52%)
Leptospira ellisii
A0A7Y7TR99
77.0 %
122
51 (90%)
01 (96%)
Bacteroidetes bacterium
A0A7C7FSI0
72.1 %
93
51 (86%)
72 (83%)
Flavobacteriales bacterium
A0A3C1W0V2
74.4 %
93
51 (87%)
01 (89%)
Succinivibrio sp
A0A4R9I8I0
76.3 %
104
51 (89%)
01 (90%)
Leptospira noumeaensis
A0A2N0AL11
76.3 %
104
51 (91%)
01 (94%)
Leptospira harrisiae
A0A4V3JY07
77.0 %
102
51 (89%)
01 (90%)
Leptospira idonii
A0A2M9ZK00
76.5 %
107
51 (93%)
01 (95%)
Leptospira perolatii
A0A3M1D4Y1
75.5 %
102
51 (89%)
01 (92%)
Deltaproteobacteria bacterium
A0A4R8MTT4
75.5 %
104
51 (91%)
01 (93%)
Leptospira meyeri
A0A371RG98
71.5 %
100
51 (91%)
01 (94%)
Parvularcula marina
A0A1Q8G0P3
74.9 %
99
51 (91%)
01 (91%)
Maricaulis sp
A0A495DN37
74.0 %
99
51 (89%)
01 (87%)
Maricaulis maris
A0A523G0G9
74.4 %
88
51 (80%)
01 (86%)
Alphaproteobacteria bacterium
A0A662BNH4
73.0 %
84
51 (68%)
01 (79%)
Bacteroidetes bacterium
A0A850SCY5
72.8 %
104
51 (88%)
01 (93%)
Parvularculaceae bacterium
A0A7V1FUN2
72.6 %
96
51 (81%)
01 (92%)
Ignavibacteriales bacterium
A0A1G9QJN8
72.4 %
95
51 (86%)
52 (59%)
Maricaulis salignorans
A0A2E9Q6U3
72.1 %
101
51 (87%)
01 (94%)
Spirochaetaceae bacterium
A0A7V0SFQ3
71.9 %
102
51 (89%)
01 (92%)
Spirochaetes bacterium
Q0ALK6
71.7 %
98
51 (88%)
01 (91%)
strain MCS10
A0A3T0E7J4
72.5 %
100
51 (91%)
01 (94%)
Glycocaulis alkaliphilus
A0A0P7VVB4
71.7 %
100
51 (91%)
01 (92%)
Oceanicaulis sp
A0A2E8RW99
70.5 %
107
51 (87%)
01 (93%)
Myxococcales bacterium
A0A3B0SZW9
70.3 %
94
51 (84%)
72 (73%)
hydrothermal vent
A0A2D7Y6B3
70.1 %
81
51 (76%)
01 (88%)
Maricaulis sp
A0A3D6A0A2
70.6 %
100
51 (93%)
01 (93%)
Oceanicaulis sp
A0A2E4Y6V4
70.0 %
105
51 (88%)
01 (91%)
Halobacteriovoraceae bacterium