Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 1 - 100. No filters applied
Search results N-end knotoid depth between 50 and 51
Knot type Category Uniprot Organism pLDDT knotcore Protein name
Unknown AF4 A0A498Q998-F1 Mycobacterium innocens 84.0 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A820YIU3-F1 Rotaria sp 82.5 Hypothetical protein
Unknown AF4 A0A817M660-F1 Rotaria sp 82.2 Hypothetical protein
Unknown AF4 A0A661AQF3-F1 bacterium 81.2 FlgD_ig domain-containing protein
Unknown AF4 A0A102EFB8-F1 Burkholderia sp 78.2 Mu-like prophage protein gp29
Unknown AF4 A0A7C8DD95-F1 Marine Group 77.9 VCBS repeat-containing protein
Unknown AF4 A0A1J1IJY3-F1 Clunio marinus 75.8 CLUMA_CG012597, isoform A
Unknown AF4 A0A3A8SLX2-F1 Corallococcus sp 74.1 Kelch-like protein
Unknown AF4 A0A6J1Z9V7-F1 Cheetah 69.0 complement C1q subcomponent subunit A
Unknown AF1-Artifact Q8IWZ3-F1 Human 57.7 Ankyrin repeat and KH domain-containing protein 1
Unknown AF1-Artifact A0A0B4K7K9-F1 Drome 56.7 Bruchpilot, isoform J
Unknown AF1-Artifact Q7TS75-F1 Mouse 49.9 APC membrane recruitment protein 1
Unknown AF1-Unassigned Q9Y2X9-F1 Human 47.5 Zinc finger protein 281
Unknown AF1-Artifact B6SJT5-F1 Maize 47.0 Uncharacterized protein
Unknown AF1-Artifact A4HYC7-F1 Leiin 45.8 Hypothetical_protein_-_conserved
Unknown AF1-Artifact A0A1D8PNM2-F1 Canal 45.6 Protein transport protein sec16
Unknown AF1-Artifact Q03661-F1 Yeast 34.3 Silent chromatin protein ESC1
Unknown AF1-Unassigned Q7Z5P9-F36 Human 30.1 Mucin-19
Unknown AF1-Artifact Q61687-F1 Mouse 27.7 Transcriptional regulator ATRX
923 AF4 A0A521BNC9-F1 Flavobacterium nitrogenifigens 73.6 Delta-60 repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein
911 AF4 A0A5N7JQ55-F1 Pseudomonas kitaguniensis 81.4 Methyl-accepting chemotaxis protein
83 AF4 A0A5E4A590-F1 Woodchuck 78.5 Structural maintenance of chromosomes protein 5
81 AF4 A0A6I6PY81-F1 Rossellomorea marisflavi 94.0 DUF3644 domain-containing protein
81 AF4 A0A2K2DTH0-F1 Purple false brome 70.2 E1 ubiquitin-activating enzyme (EC 6.2.1.45)
81 ESM1 A0A5M8REC4-F1 Bacillus swezeyi 68.1 FRG domain-containing protein
73 AF4 A0A540MEW2-F1 Siberian crab apple 71.9 Protein kinase domain-containing protein
72 AF4 A0A5E4I6S9-F1 uncultured archaeon 83.2 Carboxypeptidase regulatory-like domain protein
72 AF4 B6G1E2-F1 Clostridium hiranonis 74.9 ABC transporter, substrate-binding protein, family 5
63 AF4 A0A0S7FEM3-F1 blackstripe livebearer 88.5 VMA5A
63 AF4 A0A5B7ZPZ5-F1 Thermomonas aquatica 87.2 VWA domain-containing protein
63 AF4 I3JSD1-F1 Nile tilapia 87.0 von Willebrand factor A domain-containing protein 5A-like
63 AF4 A0A669BBN0-F1 Nile tilapia 86.3 von Willebrand factor A domain-containing protein 5A-like
63 AF4 A0A1S3NTR4-F1 Atlantic salmon 85.4 von Willebrand factor A domain-containing protein 5A-like isoform X6
63 AF4 A0A670JKU2-F1 Wall lizard 85.4 von Willebrand factor A domain containing 5A
63 AF4 A0A670YMF9-F1 Eastern brown snake 84.6 von Willebrand factor A domain containing 5A
63 AF4 A0A672HX95-F1 Jewelled blenny 84.3 von Willebrand factor A domain containing 5A
63 AF4 A0A669BPQ2-F1 Nile tilapia 83.7 von Willebrand factor A domain-containing protein 5A-like
63 AF4 W0J067-F1 Opitutaceae bacterium 78.5 VWA domain-containing protein
62 AF4 A0A142HDE0-F1 Hymenobacter sp 83.3 T9SS type A sorting domain-containing protein
62 AF4 A0A2W5LWG0-F1 Rhodanobacter denitrificans 83.1 Diguanylate cyclase
62 AF4 Q5TUJ1-F1 African malaria mosquito 80.3 AGAP010725-PA
62 AF4 A0A2K0SWX0-F1 Trichoderma gamsii 77.5 Calpain catalytic domain-containing protein
62 AF4 A0A284RUL0-F1 Armillaria root rot fungus 67.9 Tyr recombinase domain-containing protein
61 AF4 A0A2S6QQ15-F1 Alphaproteobacteria bacterium 92.0 NAD_binding_4 domain-containing protein
61 AF4 A0A453Q325-F1 Goatgrass 90.8 3-ketoacyl-CoA thiolase 2, peroxisomal
61 ESM1 A0A2G4IIS3-F1 Rhodospirillaceae bacterium 88.8 RepB domain-containing protein
61 AF4 A0A2T3ASC3-F1 Amorphotheca resinae 77.7 SMC_N domain-containing protein
61 ESM1 K2IHG3-F1 Oceanibaculum indicum 71.2 Microcystin dependent protein
61 ESM1 A0A420WBB9-F1 Oceanibaculum indicum 70.8 Microcystin-dependent protein
52 AF4 A0A094FPK4-F1 FW-2643 95.3 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A2D6RZU8-F1 Candidatus Poribacteria 91.6 Peptide transporter
52 AF4 A0A7V3PS67-F1 Armatimonadetes bacterium 91.6 DUF2079 domain-containing protein
52 AF4 A0A2E9F3Z4-F1 Candidatus Poribacteria 91.4 OPT family oligopeptide transporter
52 AF4 A0A2E4DQ85-F1 Candidatus Poribacteria 91.4 Peptide transporter
52 AF4 A0A3D2S184-F1 Candidatus Poribacteria 91.4 Peptide transporter
52 AF4 A0A846P0P9-F1 Candidatus Latescibacteria 90.8 Oligopeptide transporter, OPT family
52 AF4 G7N962-F1 Rhesus macaque 90.8 Alkaline phosphatase (EC 3.1.3.1)
52 AF4 A0A523EH78-F1 Acidobacteria bacterium 90.6 Oligopeptide transporter, OPT family
52 AF4 A0A3M1XN16-F1 Calditrichaeota bacterium 90.5 Oligopeptide transporter, OPT family
52 AF4 A0A2H5WAL2-F1 bacterium HR11 90.2 Oligopeptide transporter, OPT family
52 AF4 A0A3M1NTG7-F1 Calditrichaeota bacterium 90.2 Oligopeptide transporter, OPT family
52 AF4 A0A1V1I0H3-F1 Romboutsia ilealis 90.1 Oligopeptide transporter, OPT
52 AF4 A0A523DQG9-F1 Acidobacteria bacterium 90.0 Oligopeptide transporter, OPT family
52 AF4 A0A3D2HPG5-F1 Ruminococcus sp 89.8 Oligopeptide transporter, OPT family
52 AF4 A0A523EAX7-F1 Acidobacteria bacterium 89.8 Oligopeptide transporter, OPT family
52 AF4 A0A4W3JTM0-F1 Ghost shark 89.7 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A6L5XY87-F1 Velocimicrobium porci 89.6 Oligopeptide transporter, OPT family
52 AF4 R5YF54-F1 Roseburia sp 89.6 OPT family oligopeptide transporter
52 AF4 A0A1C6K9F1-F1 uncultured Clostridium 89.6 Oligopeptide transporter, OPT family
52 AF4 A0A644ZIA2-F1 bioreactor metagenome 89.4 Oligopeptide transporter, OPT family
52 AF4 A0A1H5UH21-F1 Lachnospira multipara 89.3 Putative oligopeptide transporter, OPT family
52 AF4 A0A1Q6TZM2-F1 Roseburia sp 89.3 Oligopeptide transporter, OPT family
52 AF4 G5IJJ0-F1 Hungatella hathewayi 89.2 OPT family oligopeptide transporter
52 AF4 A0A7X9S735-F1 Clostridium sp 89.2 Oligopeptide transporter, OPT family
52 AF4 R5ZEP2-F1 Lachnospiraceae bacterium 89.2 OPT oligopeptide transporter
52 AF4 A0A417XR55-F1 Clostridiaceae bacterium 89.2 Oligopeptide transporter, OPT family
52 AF4 A0A373J404-F1 Firmicutes bacterium 89.2 Oligopeptide transporter, OPT family
52 AF4 A0A7X8BT49-F1 Sphingobacteriales bacterium 89.2 Oligopeptide transporter, OPT family
52 AF4 A0A415PEJ1-F1 Lachnospira eligens 89.2 Oligopeptide transporter, OPT family
52 AF4 A0A1M6Y4A4-F1 Anaerotignum lactatifermentans 89.2 Putative oligopeptide transporter, OPT family
52 AF4 A0A1G9WSE1-F1 Lachnospira pectinoschiza 89.1 Putative oligopeptide transporter, OPT family
52 AF4 A0A3R6REG8-F1 Clostridiaceae bacterium 89.1 Oligopeptide transporter, OPT family
52 AF4 A0A1I7KVD8-F1 Alicyclobacillus macrosporangiidus 89.1 Putative oligopeptide transporter, OPT family
52 AF4 A0A6N2S2M0-F1 Tyzzerella nexilis 89.0 OPT oligopeptide transporter protein
52 AF4 A0A519UL35-F1 Pedobacter sp 89.0 OPT family oligopeptide transporter
52 AF4 A0A415YEW2-F1 Lachnospiraceae bacterium 89.0 Oligopeptide transporter, OPT family
52 AF4 E5VL03-F1 Lachnospiraceae bacterium 89.0 OPT oligopeptide transporter
52 AF4 N2B5H1-F1 Eubacterium plexicaudatum 89.0 OPT family oligopeptide transporter
52 AF4 A0A1Q9K462-F1 Anaerostipes sp 89.0 Oligopeptide transporter, OPT family
52 AF4 R6PVJ1-F1 Clostridium nexile 89.0 Oligopeptide transporter, OPT family
52 AF4 A0A416FUZ6-F1 Clostridiaceae bacterium 89.0 Oligopeptide transporter, OPT family
52 AF4 A0A0P1LG18-F1 Candidatus Kryptonium 89.0 Putative oligopeptide transporter, OPT family
52 AF4 A0A316QTK4-F1 Clostridiales bacterium 89.0 Oligopeptide transporter, OPT family
52 AF4 R5DZR2-F1 Eubacterium sp 89.0 Oligopeptide transporter, OPT family
52 AF4 A0A497DVQ3-F1 Candidatus Aminicenantes 88.9 Oligopeptide transporter, OPT family
52 AF4 A0A084JDH7-F1 Clostridium sulfidigenes 88.9 Peptide transporter
52 AF4 A0A415MZC9-F1 Dorea formicigenerans 88.9 Oligopeptide transporter, OPT family
52 AF4 A0A4P6M888-F1 Blautia producta 88.9 Oligopeptide transporter, OPT family
52 AF4 A0A1M4TQZ8-F1 Lactonifactor longoviformis 88.9 Putative oligopeptide transporter, OPT family
52 AF4 R6EU38-F1 Lachnospiraceae bacterium 88.9 OPT family oligopeptide transporter
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