Found: ...COUNTING... knotted stuctures in AlphaKnot 2.0. Displaying 1 - 100. No filters applied
Search results N-end knotoid depth between 0 and 1
Knot type Category Uniprot Organism pLDDT knotcore Protein name
Unknown AF4 A0A5S4F0Y5-F1 Nonomuraea turkmeniaca 85.1 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A269U1C9-F1 Streptomyces sp 84.9 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A3M5VVZ6-F1 Pseudomonas syringae pv 84.0 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A4Y3VDV2-F1 Streptomyces spinoverrucosus 84.0 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 Q9EWH3-F1 2 83.9 Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Unknown AF4 A0A1B8XYP1-F1 Western clawed frog 74.6 Retinitis pigmentosa 1-like 1 protein
Unknown AF4 A0A6P7FKT6-F1 western corn rootworm 73.7 Angiotensin-converting enzyme (EC 3.4.-.-)
Unknown AF4 A0A2N0MU94-F1 SAR202 cluster 73.5 6-bladed beta-propeller
Unknown AF4 A0A1V9Z7E6-F1 Achlya hypogyna 73.4 Uncharacterized protein
Unknown AF4 A0A4Q2ZP17-F1 Sphingobacteriales bacterium 71.0 T9SS type A sorting domain-containing protein
Unknown AF4 A0A836F5N6-F1 Pseudoatta argentina 69.2 Transporter
946 AF4 A0A1E1UXM4-F1 Bosea sp 79.8 Chromosome partition protein Smc
927 AF4 A0A496Y079-F1 Deltaproteobacteria bacterium 73.1 Histidine kinase
91 AF4 A0A7X8TZF4-F1 Vibrio aestuarianus subsp 88.1 Transcriptional regulator
91 AF4 A0A177Y386-F1 Vibrio bivalvicida 88.1 Transcriptional regulator
91 AF4 A0A2A2MTS3-F1 Vibrio coralliilyticus 87.8 Transcriptional regulator
91 AF4 A0A7Y3VKG3-F1 Vibrio sp 87.5 Transcriptional regulator
91 AF4 A0A4R5H0F0-F1 Alteromonadaceae bacterium 87.4 Transcriptional regulator
91 AF4 A0A7Z1S0M4-F1 Vibrio cyclitrophicus 87.3 Transcriptional regulator
91 AF4 A0A7D8B685-F1 Vibrio spartinae 87.2 TnsE_C domain-containing protein
91 AF4 A0A809RWW1-F1 Providencia rettgeri 87.1 TnsE_C domain-containing protein
91 AF4 A0A7T0H3E7-F1 Vibrio kanaloae 87.0 Transcriptional regulator
91 AF4 A0A5M9NWY8-F1 Vibrio gigantis 87.0 Transcriptional regulator
91 AF4 A0A1B8HD02-F1 Morganella psychrotolerans 86.8 Transcriptional regulator
91 AF4 A0A653UW23-F1 Pseudomonas sp 85.6 Glyco_hydro_38C domain-containing protein
91 AF4 A0A1L0AT73-F1 Moritella viscosa 84.9 Transposition regulatory protein
91 AF4 E6PKG3-F1 mine drainage 82.5 TnsE_C domain-containing protein
91 AF4 A0A1W9JA58-F1 Proteobacteria bacterium 81.6 TnsE_C domain-containing protein
91 AF4 A0A2T1ENX2-F1 Stenomitos frigidus 80.3 TnsE_C domain-containing protein
91 AF4 A0A7Y3JLD8-F1 Gallionella sp 80.0 TnsE_C domain-containing protein
91 AF4 A0A238D029-F1 Thiomonas cuprina 79.6 TnsE_C domain-containing protein
91 AF4 A0A250IAL3-F1 Melittangium boletus 74.1 High-affinity carbon uptake protein Hat/HatR
821 AF4 A0A1D7QKN5-F1 Pedobacter steynii 91.1 DUF1080 domain-containing protein
821 AF4 A0A5R8R1P5-F1 Pseudomonas edaphica 78.5 Type VI secretion system membrane subunit TssM
819 ESM1 A0A099CX72-F1 Oleiagrimonas soli 68.7 DUF3047 domain-containing protein
81 AF4 A0A7V2IIU1-F1 bacterium 80.7 ATP-binding cassette domain-containing protein
75 AF4 A0A2U8TTV6-F1 Pseudomonas sp 78.2 Bifunctional diguanylate cyclase/phosphodiesterase
74 AF4 A0A449INP3-F1 Pseudomonas fragi 84.4 Sulfite reductase [NADPH] flavoprotein alpha-component CysJ (EC 1.8.1.2)
74 AF4 A0A2V8U0I0-F1 Acidobacteria bacterium 73.1 Fibronectin type-III domain-containing protein
71 AF4 A0A150E801-F1 Bacillus cereus 82.3 TnsE_C domain-containing protein
71 AF4 A0A2B0MAH2-F1 Bacillus cereus 82.1 TnsE_C domain-containing protein
71 AF4 A0A0H2MND9-F1 Vibrio sp 82.0 Transposition regulatory protein
71 AF4 Q73F21-F1 Bacillus cereus 81.8 TnsE_C domain-containing protein
71 ESM1 A0A165M1R5-F1 Acidovorax sp 76.8 PUD1_2 domain-containing protein
71 AF4 A0A819PJ91-F1 Rotaria sordida 74.7 Hypothetical protein
63 AF4 A0A838RCT7-F1 Ardenticatenales bacterium 74.9 VWA domain-containing protein
63 AF4 A0A0Q1BU28-F1 Methanoculleus sp 74.7 VWA domain-containing protein
61 AF4 A0A800FZQ8-F1 Gemmatimonadetes bacterium 95.7 T5orf172 domain-containing protein
61 AF4 A0A2M7GQ86-F1 Rhodospirillales bacterium 93.8 (R)-2-haloacid dehalogenase
61 AF4 A0A519D2T0-F1 Euryarchaeota archaeon 91.4 T5orf172 domain-containing protein
61 AF4 A0A7J4GML4-F1 Candidatus Poseidoniales 90.5 GIY-YIG nuclease family protein
61 AF4 A0A871Y7P1-F1 uncultured actinobacterium 90.0 GIY-YIG nuclease family protein
61 AF4 A0A7X9UWB8-F1 Xanthomonas campestris pv. citri 84.2 Iron-uptake factor
61 ESM1 A0A519D2T0-F1 Euryarchaeota archaeon 83.3 T5orf172 domain-containing protein
61 ESM1 A0A173LXW4-F1 Aurantimicrobium minutum 78.3 T5orf172 domain-containing protein
61 AF4 A0A731ZKZ5-F1 Salmonella typhimurium 74.5 Type IV secretion protein Rhs
52 AF4 A0A7H8R1Z2-F1 Talaromyces rugulosus 94.5 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A6A6A020-F1 Dothidotthia symphoricarpi 94.3 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A0C3ALD5-F1 strain F 1598 92.8 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A2H3EMH9-F1 Bulbous honey fungus 92.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 U1GRJ3-F1 Lichen-forming fungus 91.7 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A5Q0HKZ6-F1 Candida lusitaniae 91.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A496CAP0-F1 Parabacteroides sp 91.4 DUF1080 domain-containing protein
52 AF4 A0A1Q3E6B2-F1 Shiitake mushroom 91.3 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 Q9FFF2-F1 Arath 90.7 Ubiquitin carboxyl-terminal hydrolase
52 ESM1 A0A2I1D752-F1 Aspergillus campestris 90.7 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A816V008-F1 Rape 90.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A816HWG8-F1 Rape 90.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A1E1IXB7-F1 Leishmania guyanensis 90.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A3P3Z7J1-F1 Leishmania braziliensis 90.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A3P6AAP6-F1 Wild cabbage 90.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A088RTX9-F1 Leishmania panamensis 90.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A4HD98-F1 Leishmania braziliensis 90.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 S9QWV0-F1 strain yFS286 90.2 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A2D6S0P7-F1 Candidatus Poribacteria 89.9 Inner membrane protein
52 AF4 A0A4Q4U627-F1 Monosporascus sp 89.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 S9VWF0-F1 Fission yeast 89.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A284S427-F1 Armillaria root rot fungus 88.8 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A2H3EMH9-F1 Bulbous honey fungus 88.5 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 F4P8X6-F1 Frog chytrid fungus 88.4 OPT family small oligopeptide transporter
52 AF4 A0A1V5I6P1-F1 Synergistetes bacterium ADurb 88.1 Tripartite tricarboxylate transporter TctA family protein
52 AF4 A0A6B1BSY1-F1 Gemmatimonadetes bacterium 87.2 RDD domain-containing protein
52 ESM1 A0A4U6X5K6-F1 Colletotrichum tanaceti 87.1 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A7R8W5K4-F1 Cyprideis torosa 86.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A5M3YUA9-F1 Aspergillus terreus 86.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A7S2KTA0-F1 Skeletonema marinoi 86.6 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A0H2RW66-F1 Schizopora paradoxa 86.6 OPT oligopeptide transporter
52 ESM1 A0A1Y1JZ11-F1 Common eastern firefly 86.5 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A2N0SL53-F1 Rhizophagus irregularis 86.4 von Willebrand factor type A domain protein
52 ESM1 A0A7H8R1Z2-F1 Talaromyces rugulosus 86.4 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A267GB74-F1 Macrostomum lignano 86.2 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 A0A267FVD0-F1 Macrostomum lignano 85.9 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 H2LUP9-F1 Japanese rice fish 85.7 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 ESM1 R8BHQ0-F1 strain UCR-PA7 85.3 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A0J9XCS9-F1 Oospora lactis 85.2 Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
52 AF4 A0A2I1G2N0-F1 Rhizophagus irregularis 84.7 von Willebrand factor type A domain protein
52 AF4 A0A3D2Z387-F1 Candidatus Latescibacteria 84.6 DUF3846 domain-containing protein
52 AF4 A0A399WI39-F1 Candidatus Brocadia 84.4 Gp5_OB domain-containing protein
52 AF4 A0A520YGA4-F1 Sphingomonadaceae bacterium 84.2 TraB/GumN family protein
52 AF4 A0A674MKT1-F1 Japanese pufferfish 84.1 Si:ch73-265h17.1
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