Status Status Details Main knot Project name Input data Model lengths Last status changed Job submitted Key What to compute? Closure Number of random closures Accuracy Trajectory (Knot Pull) Search Identical
FINISHED 2023-11-22 12:02:06: AF-A0A660Z1L2-F1 - main chain knotted: ... 51 (91%) Recomputed from: A0A660Z1L2-F1-AFv4 AF-A0A660Z1L2-F1.cif
2023-11-22 12:02:16 2023-11-22 12:01:41 5c12128b3f0d7c Full matrix always close by statistical methods 100 Detailed No Yes: Identity: 70%

Results for job AF-A0A660Z1L2-F1


Topology type: KNOTTED

Information
Main knot 51 (91%)
Knot fingerprint K 51 31
Global pLDDT 89.9

Artifact check
Topological complexity Knot with a low (5) number of crossings
pLDDT Knot-core Very high (98.0); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT N-end knot-core border Very high (98.2); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
pLDDT C-end knot-core border Very high (97.8); 100.0% has >70 pLDDT; 0.0% has <50 pLDDT
C-alpha clashes No clashes
Knot map

Knot cutoff: 48 %


Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Slipknot tails Slipknot loops Main knot
98.1 39-93 54 1-38, 94-104 38 11 Knot
98.0 49-82 33 1-48, 83-104 48 22 Knot
Model Sequence
MIILLLLLSASITFAQSEDEINEDDCTYNGFTLYGKIQFVESFPDITIKVVESFPDLEVKIVDSFPDDCGEWQIVDSFPDLKVKIVESFPDIKIKFVESFPGLP
Identical Structures in AlphaKnot
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
A0A660Z1L2
96.1 %
104
51 (92%)
01 (96%)
Ignavibacteriae bacterium
A0A7Y2K635
89.4 %
113
51 (90%)
01 (95%)
Ignavibacteriaceae bacterium
A0A1G0SWK8
86.3 %
111
51 (92%)
01 (95%)
Ignavibacteria bacterium
A0A7Y3BHM1
81.7 %
108
51 (91%)
01 (93%)
Ignavibacteriaceae bacterium
A0A6G0AH96
86.9 %
103
51 (90%)
01 (90%)
Chlorobi bacterium
A0A7Y5FDH9
86.9 %
103
51 (90%)
01 (91%)
Ignavibacteriaceae bacterium
A0A6M8VIY0
86.9 %
103
51 (91%)
01 (88%)
Ignavibacteriae bacterium
A0A7Y8J6Z9
79.1 %
114
51 (92%)
01 (91%)
Ignavibacteriaceae bacterium
A0A7Y8H520
79.3 %
116
51 (95%)
01 (96%)
Ignavibacteriaceae bacterium
A0A6M8VEA3
76.0 %
119
51 (94%)
01 (95%)
Ignavibacteriae bacterium
A0A1V5TDQ0
72.9 %
121
51 (89%)
01 (95%)
Ignavibacteria bacterium ADurb
A0A523NA91
86.4 %
85
51 (73%)
01 (84%)
Ignavibacteria bacterium
A0A2H6EGT5
75.4 %
122
51 (94%)
01 (92%)
bacterium BMS3Abin03
A0A3D6BC15
77.1 %
112
51 (90%)
01 (94%)
Ignavibacteriales bacterium
A0A7C9TYD9
72.4 %
113
51 (90%)
01 (96%)
Oscillatoria sp
A0A497CWM3
74.9 %
92
51 (87%)
01 (85%)
Bacteroidetes bacterium
A0A256WJ90
78.4 %
89
51 (78%)
01 (88%)
Bacteroidetes bacterium
A0A3M1D4Y1
82.0 %
102
51 (89%)
01 (92%)
Deltaproteobacteria bacterium
A0A7Y2CEH5
72.7 %
108
51 (90%)
01 (96%)
Marinicaulis sp
P73136
75.5 %
112
51 (91%)
72 (91%)
Synechocystis sp.
K9TJB5
71.2 %
112
51 (90%)
01 (94%)
Oscillatoria acuminata
A0A7V1FUN2
73.5 %
96
51 (81%)
01 (92%)
Ignavibacteriales bacterium
A0A3M1XWA8
81.4 %
102
51 (90%)
01 (95%)
Bacteroidetes bacterium
A0A2E1XDU6
73.6 %
97
51 (88%)
01 (95%)
Parvularcula sp
A0A7X7FV79
70.8 %
95
51 (91%)
01 (88%)
Bacteroidales bacterium
A0A6P1VF52
75.7 %
112
51 (89%)
01 (95%)
Synechocystis sp
A0A7Y7TR99
80.5 %
122
51 (90%)
01 (96%)
Bacteroidetes bacterium
A0A7C3ZNF1
74.0 %
95
51 (89%)
01 (91%)
Planktothricoides sp
A0A2S7KAD5
72.2 %
108
51 (91%)
01 (97%)
Marinicaulis flavus
A0A7C2T7J6
78.9 %
97
51 (89%)
01 (92%)
Alphaproteobacteria bacterium
A0A357IWI3
78.2 %
103
51 (91%)
01 (97%)
Leptospiraceae bacterium
A0A2E8PV52
78.2 %
103
51 (90%)
01 (94%)
Spirochaetaceae bacterium
A0A3C1W0V2
77.0 %
93
51 (87%)
01 (89%)
Succinivibrio sp
A0A850SM69
77.8 %
97
51 (91%)
01 (90%)
Parvularculaceae bacterium
A0A2E5S1A5
70.3 %
97
51 (88%)
01 (93%)
Leptospiraceae bacterium
A0A2E9Q6U3
77.4 %
101
51 (87%)
01 (94%)
Spirochaetaceae bacterium
A0A352LL24
78.2 %
102
51 (89%)
01 (95%)
Sutterella sp
A0A850SCY5
77.4 %
104
51 (88%)
01 (93%)
Parvularculaceae bacterium
A0A2M8HMI6
72.0 %
103
51 (91%)
01 (95%)
Leptospira sp
A0A7G8ZLD3
77.2 %
93
51 (86%)
01 (89%)
Hyphobacterium sp
A0A1Q8G0P3
76.2 %
99
51 (91%)
01 (91%)
Maricaulis sp
A0A2M7GTD8
76.8 %
93
51 (88%)
01 (85%)
Rhodobacterales bacterium
A0A239PSS6
76.3 %
105
51 (92%)
01 (93%)
Amphiplicatus metriothermophilus
A0A495DN37
75.3 %
99
51 (89%)
01 (87%)
Maricaulis maris
A0A068N1S3
72.8 %
110
51 (91%)
01 (90%)
strain PCC 6714
A0A7C4KSZ9
75.7 %
106
51 (90%)
01 (90%)
Deltaproteobacteria bacterium
A0A3B0SZW9
74.7 %
94
51 (84%)
72 (73%)
hydrothermal vent
A0A2G2EQS1
73.0 %
84
51 (67%)
01 (88%)
Fluviicola sp
A0A4V3JY07
75.9 %
102
51 (89%)
01 (90%)
Leptospira idonii
A0A0C5K5W1
71.8 %
107
51 (93%)
01 (93%)
Pandoraea vervacti
A0A1G9QJN8
73.9 %
95
51 (86%)
52 (59%)
Maricaulis salignorans
A0A4R9LN45
74.7 %
105
51 (88%)
01 (93%)
Leptospira ilyithenensis
Q0ALK6
73.3 %
98
51 (88%)
01 (91%)
strain MCS10
A0A2P2E072
73.8 %
103
51 (89%)
01 (94%)
Leptospira ryugenii
A0A4R9JJ83
73.8 %
104
51 (91%)
01 (92%)
Leptospira perdikensis
A0A6N4Q9Q3
73.6 %
104
51 (89%)
01 (90%)
Leptospira kanakyensis
A0A1F3A835
72.8 %
106
51 (86%)
01 (98%)
Alphaproteobacteria bacterium
A0A4R9I8I0
73.4 %
104
51 (89%)
01 (90%)
Leptospira noumeaensis
A0A2N0AL11
73.4 %
104
51 (91%)
01 (94%)
Leptospira harrisiae
A0A850GC46
70.0 %
95
51 (84%)
01 (93%)
Pseudenhygromyxa sp
A0A4R9LGT5
73.0 %
104
51 (90%)
01 (94%)
Leptospira vanthielii
N1VZA3
73.0 %
104
51 (89%)
01 (93%)
Leptospira vanthielii serovar Holland str
R9AB07
72.8 %
104
51 (92%)
01 (93%)
Leptospira wolbachii serovar Codice str
A0A2M9Y4K6
72.8 %
104
51 (90%)
01 (92%)
Leptospira brenneri
A0A2D7Y6B3
71.8 %
81
51 (76%)
01 (88%)
Maricaulis sp
A0A662BNH4
72.6 %
84
51 (68%)
01 (79%)
Bacteroidetes bacterium
N1W359
72.6 %
104
51 (91%)
01 (92%)
Leptospira terpstrae serovar Hualin str
A0A5F2DFE2
72.6 %
104
51 (91%)
72 (90%)
Leptospira mtsangambouensis
A0A7M3K2M5
72.6 %
104
51 (87%)
01 (96%)
Leptospira meyeri
A0A5F2D3K9
72.6 %
104
51 (88%)
01 (94%)
Leptospira meyeri
A0A4R9ISW0
72.6 %
104
51 (90%)
01 (94%)
Leptospira bourretii
A0A4R8MTT4
72.6 %
104
51 (91%)
01 (93%)
Leptospira meyeri
A0A2S9YWH1
71.6 %
141
51 (91%)
01 (96%)
Enhygromyxa salina
A0A2M9ZK00
72.5 %
107
51 (93%)
01 (95%)
Leptospira perolatii
A0A844MJA6
72.5 %
114
51 (92%)
01 (94%)
Scytonema sp
A0A372DL17
73.3 %
119
51 (95%)
01 (93%)
Limnothrix sp
A0A1C0VDQ5
73.3 %
119
51 (91%)
01 (93%)
Limnothrix sp
A0A316SKP8
73.9 %
80
51 (80%)
01 (87%)
Succinivibrio sp
A0A396YW73
71.3 %
102
51 (92%)
01 (94%)
Leptospira stimsonii
A0A2M9YR07
71.3 %
102
51 (91%)
01 (96%)
Leptospira adleri
A0A1D7UTG5
71.3 %
106
51 (93%)
01 (95%)
Leptospira tipperaryensis
R5EL07
70.6 %
109
51 (88%)
01 (97%)
Succinatimonas sp
A0A3D0QRW1
73.7 %
115
51 (92%)
01 (95%)
Flavobacteriales bacterium
A0A5F1ZAU4
71.1 %
104
51 (88%)
01 (92%)
Leptospira brenneri
A0A523G0G9
70.1 %
88
51 (80%)
01 (86%)
Alphaproteobacteria bacterium
M6CWU6
72.4 %
199
51#51 (91%)
01 (91%)
Leptospira alstonii serovar Sichuan str
T0FVC7
72.4 %
199
51#51 (88%)
01 (93%)
Leptospira alstonii serovar Pingchang str
A0A2S9XPG2
70.7 %
144
51 (93%)
01 (92%)
Enhygromyxa salina
A1ZQH7
72.2 %
147
51 (92%)
01 (96%)
Microscilla marina
A0A2N0BBR6
70.5 %
92
51 (89%)
01 (52%)
Leptospira ellisii
A0A5F2BS44
70.5 %
99
51 (92%)
01 (92%)
Leptospira yasudae
A0A5F1YI99
70.5 %
102
51 (93%)
01 (91%)
Leptospira gomenensis
A0A139WYK3
71.0 %
97
51 (86%)
01 (95%)
Scytonema hofmannii
A0A6S6SDL1
71.6 %
104
51 (94%)
01 (97%)
uncultured Sulfurovum
A0A349DMM1
71.1 %
84
51 (82%)
01 (90%)
Microscillaceae bacterium
A0A662BPU7
70.2 %
83
51 (71%)
01 (86%)
Bacteroidetes bacterium
A0A1Q3GM39
70.3 %
84
51 (79%)
01 (82%)
marine bacterium
A0A355TQ53
74.4 %
101
51 (91%)
01 (91%)
bacterium UBP9_UBA11836